Similar HOG based on pairwise relations to

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0792951.5e.5b.15b with 2 members (SH3 domain containing GRB2 like)

Opisthokonta / Metazoa / Eumetazoa / Bilateria / Protostomia / Ecdysozoa / Nematoda / Dorylaimia / Trichinella

Completeness score: 1.00

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This HOG has 62 similar HOGs:

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Rank	HOG ID	Shared orthologs	HOG size	Description
1	HOG:E0792951.5e.5b	177	516	SH3 domain containing GRB2 like
2	HOG:E0792951.5e.5b.16b.28b.9b	122	76	SH3 domain containing GRB2 like
3	HOG:E0792951.5e.5b.16b.28c.11c.11a	118	65	SH3 domain containing GRB2 like
4	HOG:E0792951.5e.5b.16b.28c.11c	86	112	SH3 domain containing GRB2 like
5	HOG:E0792951.5e.5b.16b.28c.10b	74	43	SH3 domain containing GRB2 like
6	HOG:E0792951.5e.5b.16b.28b	68	169	SH3 domain containing GRB2 like
7	HOG:E0792951.5e.5b.16a	48	31	SH3 domain containing GRB2 like
8	HOG:E0792951.5e.5b.16b.28b.8b	47	40	SH3 domain containing GRB2 like
9	HOG:E0792951.5e.5b.16b.28c	12	169	SH3 domain containing GRB2 like
10	HOG:E0792951.5e.5b.15b	12	21	SH3 domain containing GRB2 like
11	HOG:E0792951.4b	12	9	SH3 domain containing GRB2 like
12	HOG:E0792951.5e.5b.15b.27b	11	6	SH3 domain containing GRB2 like
13	HOG:E0792951.5e.5b.16b.28b.9b.7a	10	5	SH3 domain containing GRB2 like
14	HOG:E0792951.5e.5b.16b.28a	10	9	SH3 domain containing GRB2 like
15	HOG:E0792951.5e.5b.15b.26b	10	5	SH3 domain containing GRB2 like
16	HOG:E0831970.1b	6	9	BAR domain-containing protein
17	HOG:E0792951.5a.3a.3b	6	3	SH3 domain containing GRB2 like
18	HOG:E0792951.5e.5b.16b.28c.10b.10a	4	2	SH3 domain containing GRB2 like
19	HOG:E0792951.5e.5b.16b.28b.8b.6b	4	2	SH3 domain containing GRB2 like
20	HOG:E0792951.5e.5b.16b.28b.8b.6a	4	2	SH3 domain containing GRB2 like
21	HOG:E0792951.5e.5b.16b.28b.8a.4b	4	2	SH3 domain containing GRB2 like
22	HOG:E0792951.5e.5b.16b.28b.8a	4	12	SH3 domain containing GRB2 like
23	HOG:E0792951.5e.5b.16b	4	353	SH3 domain containing GRB2 like
24	HOG:E0474961	4	109	BAR domain-containing protein
25	HOG:E0831970	3	221	BAR domain-containing protein

Showing 1 to 25 of 62 rows rows per page